Your right. The rest of the comment still holds. Backup and restore.

Edit: I have to sanitise the final script and remove all the wrong commands afterwards 🤔

Neither do native and flatpak vscode work the same way. It’s about that OP decides it, not the user.

It looks great but I don’t like it.

You decide that firefox gets installed via apt and not flatpak. Why?

This aims at someone who already has a system and wants to have some reproducible thing for a new system.

Back the fuck up and restore from backup.

This also includes take asnapshot of flatpak apps and simply reinstall all of them on the new system.

Yes, there is a lot of improvement to automatically do all this. But not with another solution. Just use dotfiles. Dotfiles and a cloud sync thing.

Sorry to hear that!

Should you be using nextcloud aio if you use tunnels? Isn’t the aio image for people who don’t have anything else?

I use https://hub.docker.com/_/nextcloud/#running-this-image-with-docker-compose

It works like a charme.

Try nextcloud with docker/podman. Take a backup/copy right before upgrading, upgrade, if it fails remove the upgrade and wait another week/month before upgrading or fix it. In the meanwhile, you can simply use the version that you have not yet updated.

I’ve had no problem in years

Nothing in Flatpak stipulates that it only supports GUI applications.

In fact the tutorial offers to create a CLI application:

https://unix.stackexchange.com/questions/740712/does-flatpak-support-command-line-applications